{
  "_id": "6a103555acfb0bcc41c99a45",
  "Package": "msaR",
  "Title": "Multiple Sequence Alignment for R Shiny",
  "Version": "0.6.0",
  "Authors@R": "c(person(\"Benedikt\", \"Rauscher\", email = \"b.rauscher@dkfz-heidelberg.de\", role = c(\"aut\", \"cph\")),\nperson('Zachary', 'Charlop-Powers', role=c('cre', 'aut'), email='zach.charlop.powers@gmail.com'))",
  "Description": "Visualises multiple sequence alignments dynamically within\nthe Shiny web application framework.",
  "License": "BSL-1.0",
  "RoxygenNote": "7.1.1",
  "VignetteBuilder": "knitr",
  "Config/testthat/edition": "3",
  "Config/pak/sysreqs": "cmake make libuv1-dev",
  "Repository": "https://zachcp.r-universe.dev",
  "Date/Publication": "2021-09-22 02:12:33 UTC",
  "RemoteUrl": "https://github.com/zachcp/msar",
  "RemoteRef": "HEAD",
  "RemoteSha": "bea35f214a4634d3cf34d216990b772d6d1e8c88",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-12 07:22:25 UTC",
    "User": "root"
  },
  "Author": "Benedikt Rauscher [aut, cph],\nZachary Charlop-Powers [cre, aut]",
  "Maintainer": "Zachary Charlop-Powers <zach.charlop.powers@gmail.com>",
  "MD5sum": "9ebad2ee1e99073976f87aed4b48ba40",
  "_user": "zachcp",
  "_type": "src",
  "_file": "msaR_0.6.0.tar.gz",
  "_fileid": "0c2f3a5d403906a6020ee99c7b7d414a67c6a41e15354ad9f414e669b8e075ac",
  "_filesize": 254320,
  "_sha256": "0c2f3a5d403906a6020ee99c7b7d414a67c6a41e15354ad9f414e669b8e075ac",
  "_created": "2026-05-12T07:22:25.000Z",
  "_published": "2026-05-22T10:52:05.959Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77365149388,
      "time": 130,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6938098266"
    },
    {
      "job": 77365149591,
      "time": 123,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6938094739"
    },
    {
      "job": 77365149738,
      "time": 134,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6938097722"
    },
    {
      "job": 77365149361,
      "time": 122,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6938094408"
    },
    {
      "job": 77365149113,
      "time": 156,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6938059436"
    },
    {
      "job": 77365149065,
      "time": 114,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7158751705"
    },
    {
      "job": 77365149703,
      "time": 73,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6938081535"
    },
    {
      "job": 77365149614,
      "time": 71,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6938081236"
    },
    {
      "job": 77365149436,
      "time": 89,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6938085111"
    }
  ],
  "_buildurl": "https://github.com/r-universe/zachcp/actions/runs/25719667697",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/zachcp/msar",
  "_commit": {
    "id": "bea35f214a4634d3cf34d216990b772d6d1e8c88",
    "author": "zachcp <zachcp@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #15 from zachcp/jsfix\n\nJsfix",
    "time": 1632276753
  },
  "_maintainer": {
    "name": "Zachary Charlop-Powers",
    "email": "zach.charlop.powers@gmail.com",
    "login": "zachcp",
    "uuid": 1260667
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.2.2",
      "role": "Depends"
    },
    {
      "package": "ape",
      "role": "Imports"
    },
    {
      "package": "htmlwidgets",
      "role": "Imports"
    },
    {
      "package": "Biostrings",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "zachcp",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_topics": [
    "alignment",
    "htmlwidgets",
    "multiple",
    "sequence"
  ],
  "_stars": 8,
  "_contributors": [
    {
      "user": "zachcp",
      "count": 89,
      "uuid": 1260667
    },
    {
      "user": "benediktrauscher",
      "count": 4,
      "uuid": 9319339
    }
  ],
  "_userbio": {
    "uuid": 1260667,
    "type": "user",
    "name": "zachcp"
  },
  "_downloads": {
    "count": 304,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/msaR"
  },
  "_devurl": "https://github.com/zachcp/msar",
  "_searchresults": 79,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/msaR.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/zachcp/msar",
  "_realowner": "zachcp",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2016-12-06"
    },
    {
      "version": "0.2.0",
      "date": "2017-02-24"
    },
    {
      "version": "0.3.0",
      "date": "2017-10-01"
    },
    {
      "version": "0.5.0",
      "date": "2021-01-05"
    },
    {
      "version": "0.6.0",
      "date": "2021-09-22"
    }
  ],
  "_exports": [
    "as.fasta",
    "as.sequences",
    "msaR",
    "msaROutput",
    "renderMsaR"
  ],
  "_help": [
    {
      "page": "as.fasta",
      "title": "as.fasta",
      "topics": [
        "as.fasta"
      ]
    },
    {
      "page": "as.sequences",
      "title": "as.sequences",
      "topics": [
        "as.sequences"
      ]
    },
    {
      "page": "msaR",
      "title": "msaR",
      "topics": [
        "msaR"
      ]
    },
    {
      "page": "msaROutput",
      "title": "Widget output function for use in Shiny",
      "topics": [
        "msaROutput"
      ]
    },
    {
      "page": "renderMsaR",
      "title": "Widget render function for use in Shiny",
      "topics": [
        "renderMsaR"
      ]
    }
  ],
  "_readme": "https://github.com/zachcp/msar/raw/HEAD/README.md",
  "_rundeps": [
    "ape",
    "base64enc",
    "bslib",
    "cachem",
    "cli",
    "digest",
    "evaluate",
    "fastmap",
    "fontawesome",
    "fs",
    "highr",
    "htmltools",
    "htmlwidgets",
    "jquerylib",
    "jsonlite",
    "knitr",
    "lattice",
    "lifecycle",
    "memoise",
    "mime",
    "nlme",
    "R6",
    "rappdirs",
    "Rcpp",
    "rlang",
    "rmarkdown",
    "sass",
    "tinytex",
    "xfun",
    "yaml"
  ],
  "_vignettes": [
    {
      "source": "msaR.Rmd",
      "filename": "msaR.html",
      "title": "Using msaR",
      "author": "Zach Charlop-Powers",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Basic Usage",
        "Customized MSAs",
        "Protein MSA",
        "Use as a Shiny widget"
      ],
      "created": "2016-11-30 16:24:54",
      "modified": "2020-12-25 22:46:03",
      "commits": 7
    }
  ],
  "_score": 5.4996870826184034,
  "_indexed": true,
  "_nocasepkg": "msar",
  "_universes": [
    "zachcp"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.6.0",
      "date": "2026-05-12T07:24:36.000Z",
      "distro": "noble",
      "commit": "bea35f214a4634d3cf34d216990b772d6d1e8c88",
      "fileid": "ae46577a1498f2d41eb7cfe009942df4cd1bb7449a5bae467a1d164f4b6ef5ee",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zachcp/actions/runs/25719667697"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.6.0",
      "date": "2026-05-12T07:24:24.000Z",
      "distro": "noble",
      "commit": "bea35f214a4634d3cf34d216990b772d6d1e8c88",
      "fileid": "d618557ae60b2ec88bd10f90a9aade04b3ed0fcc75be6fae640a529101755d81",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zachcp/actions/runs/25719667697"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.6.0",
      "date": "2026-05-12T07:24:32.000Z",
      "commit": "bea35f214a4634d3cf34d216990b772d6d1e8c88",
      "fileid": "e70a7ae7ba825322d439bb06842f30f66824a2afed8106d1a24b16312b871bcf",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zachcp/actions/runs/25719667697"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.6.0",
      "date": "2026-05-12T07:24:20.000Z",
      "commit": "bea35f214a4634d3cf34d216990b772d6d1e8c88",
      "fileid": "294dd12dc8ff5b660dcae437b70abf7245d44cb43a075601fa95650c6353afff",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zachcp/actions/runs/25719667697"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.6.0",
      "date": "2026-05-12T07:23:33.000Z",
      "commit": "bea35f214a4634d3cf34d216990b772d6d1e8c88",
      "fileid": "b34b3abc7f46074d352047f8de8d065c1a5b86b5da793b36e515a502e645ee24",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zachcp/actions/runs/25719667697"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.6.0",
      "date": "2026-05-12T07:23:32.000Z",
      "commit": "bea35f214a4634d3cf34d216990b772d6d1e8c88",
      "fileid": "cd50ffa4ca33aa35924c592f37dea2539e22bcf7ef6072a8f2b436b131735de7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zachcp/actions/runs/25719667697"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.6.0",
      "date": "2026-05-12T07:23:43.000Z",
      "commit": "bea35f214a4634d3cf34d216990b772d6d1e8c88",
      "fileid": "65c1cf82d00e1cd760c19413314a7b738ac08201cee61c16d72091eb3dbc8cc8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zachcp/actions/runs/25719667697"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.6.0",
      "date": "2026-05-22T10:51:46.000Z",
      "commit": "bea35f214a4634d3cf34d216990b772d6d1e8c88",
      "fileid": "f7d1c668d299483f2cb8686cf9969f7babdfc5cdb08381632bf3db4dc86caa72",
      "status": "success",
      "buildurl": "https://github.com/r-universe/zachcp/actions/runs/25719667697"
    }
  ]
}